Publications

A full list of publications is available on Google Scholar.

2026

Histopathology-based Spatial Profiling of Immune and Molecular Features Predicts Cancer risk in Barrett’s Esophagus

Caner Ercan, Xiaoxi Pan, Thomas G Paulson, Matthew D Stachler, Fahire Göknur Akarca, William M Grady, Carlo C Maley, Yinyin Yuan. Cancer Research, 2026.

AI-derived tumor-infiltrating lymphocytes enhance the prediction of pathologic complete response in early-stage triple-negative breast cancer

Xiaoxi Pan, Caner Ercan, Zhongya Wang, Roland L Bassett, Karina B Pinao Gonzales, Gaiane M Rauch, Beatriz E Adrada, Rosalind P Candelaria, Debu Tripathy, Jennifer K Litton, Sharon H Giordano, Vicente Valero, Banu Arun, Alyson Clayborn, Kiran Virani, Jason White, Qingqing Ding, Aysegul A Sahin, William Fraser Symmans, Clinton Yam, Lei Huo, Yinyin Yuan. npj Breast Cancer, 2026.

VitaminP: cross-modal learning enables whole-cell segmentation from routine histology

Yasin Shokrollahi, Karina B Pinao Gonzales, Elizve N Barrientos Toro, Paul Acosta, Patient Mosaic Team, Pingjun Chen, Yinyin Yuan, Xiaoxi Pan. arXiv preprint, 2026.

Multi-Regional CT Radiomics Fusion to Quantify Pathology-Derived Pollutant Burden in Lung Cancer

Yutong Li, Xiaoxi Pan, Abishek Balachandran, Carmen Behrens, Maria Esther Salvatierra, Luisa Maren Solis Soto, Chingyi Young, Yinyin Yuan, Chengyue Wu. MICCAI, 2026.

Tumor microenvironment transcriptional activity enables robust stratification of chemotherapy response in triple-negative breast cancer

Yaoyi Dai, Xiaoxi Pan, Shuai Guo, Shuangxi Ji, Shaolong Cao, Matthew Montierth, Yujie Jiang, Leming Shi, Shabnam Shalapour, Gloria V Echeverria, Lucy Yates, Johan Staaf, Jeffrey T Chang, Bora Lim, Yinyin Yuan, Wenyi Wang. Cell Reports Medicine, 2026.

2025

CellSymphony: Deciphering the molecular and phenotypic orchestration of cells with single-cell pathomics

Paul H Acosta, Pingjun Chen, Simon P Castillo, Maria Esther Salvatierra, Yinyin Yuan, Xiaoxi Pan. CVPR workshop spotlight, 2025.

2024

The artificial intelligence-based model ANORAK improves histopathological grading of lung adenocarcinoma

Xiaoxi Pan, Khalid AbdulJabbar, Jose Coelho-Lima, Anca-Ioana Grapa, Hanyun Zhang, Ho Kwan Alvin Cheung, Juvenal Baena, Takahiro Karasaki, Claire Wilson, Marco Sereno, Selvaraju Veeriah, Sarah Aitken, Allan Hackshaw, Andrew Nicholson, Mariam Jamal-Hanjani, Charles Swanton, Yinyin Yuan, John Le Quesne, David Moore. Nature Cancer, 2024.

Before 2024

Multi-view separable pyramid network for AD prediction at MCI Stage by 18F-FDG brain PET imaging

Xiaoxi Pan, Trong-Le Phan, Mouloud Adel, Caroline Fossati, Thierry Gaidon, Julien Wojak, Eric Guedj. IEEE Transactions on Medical Imaging, 2021.